EU-GMP batch record software for medical cannabis

In short365Phyta's Phyta GMP module keeps master and executed batch records as controlled records in Microsoft Dynamics 365 Business Central, links QC results, CoAs, deviations and CAPA to each lot, and lets the Qualified Person certify release with an electronic signature. A lot cannot be released while a deviation is open or a test is missing. It is designed to support EU-GMP Chapter 4, Annex 16 and Annex 11; validation stays with you, as Annex 11 requires and GAMP 5 describes.

What EU-GMP asks of a batch record

The content of a batch record is set by Chapter 4 of EU-GMP Part I (Documentation). Section 4.20 requires a batch processing record for each batch, based on the currently approved manufacturing formula and processing instructions. It must contain:

  • the name and batch number of the product;
  • dates and times of the start, of significant intermediate stages and of completion;
  • who performed each significant step and, where appropriate, who checked it;
  • the batch number and quantity of each starting material actually weighed;
  • the processing operations and events, and the major equipment used;
  • the in-process controls, who carried them out and the results;
  • the yield at the relevant stages of manufacture;
  • notes on special problems, with signed authorisation for any deviation from the instructions;
  • approval by the person responsible for the processing operations.

Section 4.21 adds a batch packaging record with checks for identity and conformity, the packaging line used, and a reconciliation of printed packaging materials and bulk product issued, used, destroyed or returned. The rules on how records are made apply to both: records are completed at the time each action is taken (4.8), any alteration is signed and dated and leaves the original readable (4.9), and for electronic records the regulated user defines which data are raw data. Batch documentation is kept for one year after the batch expires or at least five years after QP certification, whichever is longer (4.11).

For medical cannabis, EU-GMP Annex 7 on herbal medicinal products adds what the processing instructions must describe: operations such as cleaning, drying, crushing and sifting, with drying times and temperatures and the methods used to control cut size, and written records showing that each container of herbal substance was examined for foreign matter or signs of decay.

From batch record to QP certification

Article 51 of Directive 2001/83/EC makes the Qualified Person responsible for certifying that each batch was manufactured and checked in line with the law and its marketing authorisation. EU-GMP Annex 16 sets out how. Before certifying, the QP must be assured, among other things, that all records are complete and endorsed and all in-process controls made (1.7.11), that QC data comply with the finished product specification (1.7.13), and that all investigations relating to the batch, including out-of-specification and out-of-trend results, are complete (1.7.16).

An unexpected deviation does not automatically stop certification: section 3 of Annex 16 allows it once the deviation has been investigated, its root cause corrected and its impact assessed as negligible. Certification is recorded in a register or equivalent document, kept up to date and available to the authority for at least five years (1.10.1). Until certification, the batch stays at the manufacturing site or moves under quarantine, and section 4.2 accepts electronic safeguards against premature release, such as validated computerised systems.

What Annex 11 adds when the record is electronic

Once the batch record and the certification live in software, EU-GMP Annex 11 (computerised systems) applies. The application must be validated and the IT infrastructure qualified. For batch records the clauses inspectors look at first are:

  • Section 9, audit trails: a risk-based, system-generated record of GMP-relevant changes and deletions, with the reason documented, readable and regularly reviewed.
  • Section 12.4, identity: the system records who entered, changed, confirmed or deleted data, with the date and time.
  • Section 14, electronic signatures: the same impact as a handwritten signature within the company, permanently linked to the record, with the time and date applied.
  • Section 15, batch release: only Qualified Persons may certify, the system identifies and records the person certifying, and certification uses an electronic signature.
  • Section 8.2, printouts: for records supporting batch release, it should be possible to print a copy showing whether data changed after original entry.

US buyers will also ask about 21 CFR Part 11, the FDA rule on electronic records and signatures. The Annex 11 checklist for a cannabis ERP goes through all 17 clauses.

How Phyta GMP keeps the record

The table maps each requirement to what 365Phyta does and what remains your responsibility. "Designed to support" is deliberate: the system supports compliance; your quality system and your validation make you compliant.

RequirementRuleWhat 365Phyta doesWhat stays with you
Batch processing and packaging recordsChapter 4, sections 4.17 to 4.19 (formula and instructions) and 4.20 to 4.21 (records)Master and executed batch records as controlled records; drying, trimming, irradiation, extraction and packaging run as EU-GMP process orders.Approving master records and instructions; defining which data are raw data.
Records made at the timeChapter 4, section 4.8Entries are made at the step, including on the floor through WMS Mobile devices, and every entry is tied to a named user.SOPs and training for the people making the entries.
Starting materials and genealogyChapter 4, section 4.20(d); Annex 7Starting-material documentation carried from the cultivation record into the processing batch; lot genealogy from plant batch to finished lot.Supplier qualification and GACP audits of growers.
QC results against specificationAnnex 16, section 1.7.13QC specifications per market and CoA import, linked to each lot.Test methods, sampling plans and laboratory work.
Deviations and CAPAChapter 4, section 4.20(h); Annex 16, sections 1.7.16 and 3Deviations, CAPA and change handled as controlled records; release is blocked while a deviation is open or a test is missing.Investigating each deviation and assessing its impact.
Audit trailAnnex 11, sections 9 and 12.4GMP-relevant events appended to an immutable event ledger with the user, date and time.Regular audit-trail review and your procedure for recording the reason for a change.
QP certificationAnnex 16; Annex 11, sections 14 and 15QP certification by electronic signature, linked to the signed record and showing who signed, when and with what meaning.Deciding who holds QP rights and keeping the certification register current.
Retention samplesAnnex 19Reference and retention samples linked to the lot they represent.Storing the samples and keeping them for the required period.
ValidationAnnex 11, section 4; Annex 15; GAMP 5IQ/OQ scripts, a requirements traceability matrix and an annual computerised-system review report, updated for each major version.User requirements, risk assessment, performance qualification and the validation report.

Items not listed here, such as printouts showing changed data (Annex 11, section 8.2), are best checked in your own qualification: ask for them in a demo and cover them in your OQ and PQ.

The QP's question: can I release this batch?

The QP wants to know whether a batch can be released and defended in an inspection. In 365Phyta that answer sits on the lot: the executed batch record, the QC results against the specification for its market, the imported CoA, the status of every deviation and CAPA, the retention samples, and the signature that certified it. If a deviation is open or a test is missing, the release is blocked rather than left to a checklist.

Where 365Phyta fits

Phyta GMP (with Vanguard Production) is part of the Processor bundle (€349 per full user per month all-in) and the Integrated bundle, and runs production on Business Central Essentials, so no user needs a Premium licence. Importers that release batches from third countries can add Phyta GMP for importers for their QA and QP users. The validation pack is included with Processor and Integrated implementations for the first site. See 365Phyta for EU-GMP processors, the compliance overview and the glossary.

FAQ

Can a QP release a lot with an open deviation in 365Phyta?

No. The system will not let a lot be released with an open deviation or a missing test. Annex 16 allows certification after an unexpected deviation only once it has been investigated, its root cause corrected and its impact assessed. 365Phyta enforces this by requiring the deviation to be closed before release.

How long must batch records be kept?

EU-GMP Chapter 4 (section 4.11) requires batch documentation to be kept for one year after the expiry of the batch or at least five years after the QP certified it, whichever is longer. The QP's certification register must be available to the authority for at least five years (Annex 16, section 1.10.1).

Is the batch record software validated?

No vendor can sell a validated system. Under EU-GMP Annex 11 and GAMP 5 the regulated company validates the system for its intended use in its own environment. 365Phyta supplies IQ/OQ scripts, a requirements traceability matrix and an annual computerised-system review report so your team can complete performance qualification.

Do we need Business Central Premium to run production?

No. Processing and production run on 365Phyta's own process-order engine on Business Central Essentials, so no user needs a Premium licence.

Can QC specifications differ by market?

Yes. QC specifications are set per market, so one product can carry the limits and labels that Germany and Portugal each require, and CoA results are imported against the lot.

Sources

  1. EudraLex Volume 4, EU-GMP Part I, Chapter 4: Documentation (in operation since 30 June 2011).
  2. EudraLex Volume 4, Annex 16: Certification by a Qualified Person and Batch Release (in operation since 15 April 2016).
  3. EudraLex Volume 4, Annex 11: Computerised Systems (in operation since 30 June 2011).
  4. EudraLex Volume 4, Annex 7: Manufacture of Herbal Medicinal Products.
  5. Directive 2001/83/EC on the Community code relating to medicinal products for human use, Article 51.
  6. European Commission, EudraLex Volume 4 (Annexes 15 and 19).
  7. US FDA, 21 CFR Part 11: Electronic records; electronic signatures.

Last reviewed: September 2026. This page describes software capabilities; it is not legal or regulatory advice.

See a batch go from record to release

30 minutes with a Business Central consultant who knows GMP: an executed batch record, a blocked release and the QP's e-signature.